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 f S(   s   Computes a DWT (Discrete Wavelet Transform) and a detector based on the energy of the signal

	@signal: numerized audio signal
	@wavelet: PyWavelets wavelet type
	@level: level of decomposition. Level=6 gives 2 ^ 6 = 64 rows
	@normalized: normalization of the scalogram
	@freq_range: frequency range where we look for information
	@detector_type: energy, diff(energy) or diff(diff(energy))
	@smooth: smoothing of the detector with a moving average ie convolution with ones(x)

	returns: an array detector made accordingly to the specified rulest   wavelett   leveli    i   R   Nt   d_energyt	   d2_energyt   modet   same(   t	   scalogramt   typet   intt   valuest   shapet   sumt   difft   hstackt   Falset   convolvet   onest   float(   t   signalR   R   t
   normalizedt
   freq_ranget   detector_typet   smootht   scalot   h_freqt   l_freqt   detector(    (    sK   /net/nas-lsis-3/SABIOD/METHODES/NICOLAS/NORTEK/CODE/transient_detector_2.pyR      s.    

(t   meang      à?c         C   s®   | s‰ | d k rF | r/ d | | j  ƒ  } q† d | | j  ƒ  } q‰ | d k r‰ | ro d | t | ƒ } q† d | t | ƒ } q‰ n  | rž | | k } n | | k  } | S(   sÊ  Transforms a detector array into a boolean array, with 1 where there is a detection and 0 otherwise

	@scalo: scalogram
	@detector: detector previously computed on the scalogram
	@threshold_type: mean or average
	@threshold_coeff: if threshold_coeff == 0.3, values 30% above the  signal.mean() will trigger a detection
	@external: absolute threshold, if previously computed on a broader time window
	@above: > or < threshold

	returns: a booleanized detectorR   i   t   median(   R   R   (   R   R   t   threshold_typet   threshold_coefft   externalt   abovet	   thresholdt   booleanized(    (    sK   /net/nas-lsis-3/SABIOD/METHODES/NICOLAS/NORTEK/CODE/transient_detector_2.pyR%   7   s    gš™™™™™É?c         C   s5   t  |  ƒ t t |  ƒ ƒ | k r+ t } n t } | S(   sÍ   Returns the decision based on the per sample detection

	@booleanized: booleanized detector
	@threshold: % of detection above which we decide the window is actually positive

	returns: a decision (boolean)(   R   R   t   lent   TrueR   (   R%   R$   t   decision(    (    sK   /net/nas-lsis-3/SABIOD/METHODES/NICOLAS/NORTEK/CODE/transient_detector_2.pyR(   V   s    "	gš™™™™™¹?c         C   sO   t  |  ƒ }  t |  ƒ t t |  ƒ t |  d Aƒ ƒ | k rE t } n t } | S(   s  Returns the decision based on decisions made on several windows of signal
	
	@decisions: decisions made upon several windows of signal
	@threshold: % of positive decisions above which we decide the group is positive as a whole

	returns: a decision (boolean)i   (   t   arrayR   R   R'   R   (   t	   decisionsR$   R(   (    (    sK   /net/nas-lsis-3/SABIOD/METHODES/NICOLAS/NORTEK/CODE/transient_detector_2.pyt	   agregatede   s
    0	t   __main__s   Testing ...sO   /NAS3/SABIOD/SITE/NORTEKMED/SAMPLE_SOUNDS/BOTTLENOSE/04._Bottlenose_dolphin.wavs   Done in s3   seconds (the count can be wrong if on utln servers)N(   i   i(   (   t   pylabt   timet   dwt_1R   R   R'   R%   R(   R+   t   __name__t   asctimet   tict	   soundfilet   scalt   detect   bt   dt   a(    (    (    sK   /net/nas-lsis-3/SABIOD/METHODES/NICOLAS/NORTEK/CODE/transient_detector_2.pyt   <module>   s    

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